Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LGR5O75473 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LGR5O75473 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LGR5O75473 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LGR5O75473 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LGR5O75473 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LGR5O75473 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.34■□□□□ 0.85
LGR5O75473 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.34■□□□□ 0.85
LGR5O75473 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LGR5O75473 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.34■□□□□ 0.85
LGR5O75473 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.34■□□□□ 0.85
LGR5O75473 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LGR5O75473 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.34■□□□□ 0.85
LGR5O75473 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LGR5O75473 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LGR5O75473 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LGR5O75473 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LGR5O75473 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LGR5O75473 LINC01126-201ENST00000623515 1646 ntBASIC20.34■□□□□ 0.85
LGR5O75473 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.34■□□□□ 0.85
LGR5O75473 AL031598.1-201ENST00000561511 1773 ntBASIC20.34■□□□□ 0.85
LGR5O75473 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LGR5O75473 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.33■□□□□ 0.85
LGR5O75473 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
LGR5O75473 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.33■□□□□ 0.85
LGR5O75473 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LGR5O75473 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LGR5O75473 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LGR5O75473 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.33■□□□□ 0.85
LGR5O75473 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LGR5O75473 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
LGR5O75473 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.33■□□□□ 0.85
LGR5O75473 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.33■□□□□ 0.85
LGR5O75473 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.33■□□□□ 0.85
LGR5O75473 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LGR5O75473 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.33■□□□□ 0.85
LGR5O75473 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
LGR5O75473 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.33■□□□□ 0.85
LGR5O75473 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.33■□□□□ 0.85
LGR5O75473 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.33■□□□□ 0.85
LGR5O75473 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LGR5O75473 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LGR5O75473 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.33■□□□□ 0.84
LGR5O75473 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LGR5O75473 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LGR5O75473 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LGR5O75473 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
LGR5O75473 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LGR5O75473 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LGR5O75473 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LGR5O75473 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.32■□□□□ 0.84
LGR5O75473 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
LGR5O75473 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.32■□□□□ 0.84
LGR5O75473 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.32■□□□□ 0.84
LGR5O75473 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.32■□□□□ 0.84
LGR5O75473 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
LGR5O75473 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.32■□□□□ 0.84
LGR5O75473 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.32■□□□□ 0.84
LGR5O75473 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.32■□□□□ 0.84
LGR5O75473 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LGR5O75473 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGR5O75473 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LGR5O75473 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGR5O75473 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGR5O75473 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.31■□□□□ 0.84
LGR5O75473 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LGR5O75473 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.31■□□□□ 0.84
LGR5O75473 VENTXP7-201ENST00000475503 772 ntBASIC20.31■□□□□ 0.84
LGR5O75473 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGR5O75473 AC011840.4-201ENST00000578471 627 ntBASIC20.31■□□□□ 0.84
LGR5O75473 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LGR5O75473 AC138894.3-201ENST00000603787 634 ntBASIC20.31■□□□□ 0.84
LGR5O75473 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LGR5O75473 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGR5O75473 NSUN5P1-202ENST00000421140 1535 ntBASIC20.31■□□□□ 0.84
LGR5O75473 NSUN5P2-203ENST00000457352 1529 ntBASIC20.31■□□□□ 0.84
LGR5O75473 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LGR5O75473 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.31■□□□□ 0.84
LGR5O75473 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.31■□□□□ 0.84
LGR5O75473 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
LGR5O75473 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LGR5O75473 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.3■□□□□ 0.84
LGR5O75473 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.3■□□□□ 0.84
LGR5O75473 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
LGR5O75473 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LGR5O75473 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
LGR5O75473 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LGR5O75473 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms