Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC063952.2-201ENST00000498792 1227 ntBASIC17.12■□□□□ 0.33
TRIM3O75382 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM3O75382 MIR3180-5-201ENST00000583743 153 ntBASIC17.12■□□□□ 0.33
TRIM3O75382 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM3O75382 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 AL109659.2-201ENST00000606809 1674 ntBASIC17.12■□□□□ 0.33
TRIM3O75382 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 AC006333.2-201ENST00000607957 2099 ntBASIC17.12■□□□□ 0.33
TRIM3O75382 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM3O75382 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM3O75382 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM3O75382 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM3O75382 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM3O75382 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM3O75382 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRIM3O75382 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM3O75382 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM3O75382 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRIM3O75382 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TRIM3O75382 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 RCC2P3-201ENST00000418112 1537 ntBASIC17.11■□□□□ 0.33
TRIM3O75382 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 AC009113.1-201ENST00000570267 2443 ntBASIC17.11■□□□□ 0.33
TRIM3O75382 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM3O75382 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
TRIM3O75382 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM3O75382 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM3O75382 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM3O75382 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 AC140113.3-201ENST00000605663 199 ntBASIC17.11■□□□□ 0.33
TRIM3O75382 AL023973.1-201ENST00000624619 620 ntBASIC17.11■□□□□ 0.33
TRIM3O75382 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM3O75382 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM3O75382 AC036111.1-201ENST00000533973 1582 ntBASIC17.11■□□□□ 0.33
TRIM3O75382 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRIM3O75382 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM3O75382 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRIM3O75382 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM3O75382 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM3O75382 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TRIM3O75382 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 AL133373.2-201ENST00000623187 2828 ntBASIC17.1■□□□□ 0.33
TRIM3O75382 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM3O75382 KRT18P35-201ENST00000510488 1269 ntBASIC17.1■□□□□ 0.33
TRIM3O75382 AC022616.7-201ENST00000525383 220 ntBASIC17.1■□□□□ 0.33
TRIM3O75382 AL441883.1-201ENST00000566170 1045 ntBASIC17.1■□□□□ 0.33
TRIM3O75382 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRIM3O75382 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 AL445228.2-201ENST00000605589 952 ntBASIC17.1■□□□□ 0.33
TRIM3O75382 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM3O75382 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRIM3O75382 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM3O75382 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM3O75382 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM3O75382 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM3O75382 AC018470.1-201ENST00000624790 3129 ntBASIC17.09■□□□□ 0.33
TRIM3O75382 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM3O75382 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 FAM8A6P-201ENST00000407496 1135 ntBASIC17.09■□□□□ 0.33
TRIM3O75382 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM3O75382 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.09■□□□□ 0.33
TRIM3O75382 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM3O75382 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM3O75382 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms