Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PTP4A3O75365 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.54■□□□□ 0.24
PTP4A3O75365 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.54■□□□□ 0.24
PTP4A3O75365 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTP4A3O75365 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PTP4A3O75365 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.54■□□□□ 0.24
PTP4A3O75365 AP003071.4-201ENST00000562276 1284 ntBASIC16.54■□□□□ 0.24
PTP4A3O75365 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.54■□□□□ 0.24
PTP4A3O75365 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.54■□□□□ 0.24
PTP4A3O75365 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PTP4A3O75365 CR769767.2-201ENST00000622735 460 ntBASIC16.54■□□□□ 0.24
PTP4A3O75365 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.54■□□□□ 0.24
PTP4A3O75365 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.54■□□□□ 0.24
PTP4A3O75365 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.54■□□□□ 0.24
PTP4A3O75365 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PTP4A3O75365 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTP4A3O75365 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PTP4A3O75365 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTP4A3O75365 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.53■□□□□ 0.24
PTP4A3O75365 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.53■□□□□ 0.24
PTP4A3O75365 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.53■□□□□ 0.24
PTP4A3O75365 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.53■□□□□ 0.24
PTP4A3O75365 KRT18P23-201ENST00000435622 1283 ntBASIC16.53■□□□□ 0.24
PTP4A3O75365 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.53■□□□□ 0.24
PTP4A3O75365 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.53■□□□□ 0.24
PTP4A3O75365 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.53■□□□□ 0.24
PTP4A3O75365 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.53■□□□□ 0.24
PTP4A3O75365 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PTP4A3O75365 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A3O75365 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTP4A3O75365 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.53■□□□□ 0.24
PTP4A3O75365 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A3O75365 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A3O75365 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A3O75365 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A3O75365 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.52■□□□□ 0.24
PTP4A3O75365 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A3O75365 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PTP4A3O75365 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A3O75365 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.52■□□□□ 0.24
PTP4A3O75365 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
PTP4A3O75365 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A3O75365 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PTP4A3O75365 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A3O75365 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A3O75365 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.52■□□□□ 0.24
PTP4A3O75365 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PTP4A3O75365 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PTP4A3O75365 RBM17P1-201ENST00000453646 1190 ntBASIC16.52■□□□□ 0.24
PTP4A3O75365 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.52■□□□□ 0.24
PTP4A3O75365 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.52■□□□□ 0.24
PTP4A3O75365 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.52■□□□□ 0.24
PTP4A3O75365 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A3O75365 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A3O75365 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PTP4A3O75365 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.23
PTP4A3O75365 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
PTP4A3O75365 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A3O75365 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms