Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEF4O60810 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.66■□□□□ 0.42
PRAMEF4O60810 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 AC211429.1-201ENST00000415277 523 ntBASIC17.65■□□□□ 0.42
PRAMEF4O60810 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 GCSHP2-201ENST00000560971 527 ntBASIC17.65■□□□□ 0.42
PRAMEF4O60810 AL512604.3-201ENST00000569583 964 ntBASIC17.65■□□□□ 0.42
PRAMEF4O60810 MIR3917-201ENST00000580971 93 ntBASIC17.65■□□□□ 0.42
PRAMEF4O60810 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 AL023973.1-201ENST00000624619 620 ntBASIC17.65■□□□□ 0.42
PRAMEF4O60810 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 AC008764.6-201ENST00000595909 2069 ntBASIC17.65■□□□□ 0.42
PRAMEF4O60810 AC067852.2-201ENST00000590513 2313 ntBASIC17.65■□□□□ 0.42
PRAMEF4O60810 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PRAMEF4O60810 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEF4O60810 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 AL157888.1-201ENST00000631930 593 ntBASIC17.64■□□□□ 0.41
PRAMEF4O60810 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.64■□□□□ 0.41
PRAMEF4O60810 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEF4O60810 AC005332.8-201ENST00000622750 2735 ntBASIC17.63■□□□□ 0.41
PRAMEF4O60810 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF4O60810 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PRAMEF4O60810 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms