Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.64□□□□□ -0.07
CUBNO60494 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.64□□□□□ -0.07
CUBNO60494 MIR3180-4-201ENST00000582223 153 ntBASIC14.64□□□□□ -0.07
CUBNO60494 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.64□□□□□ -0.07
CUBNO60494 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.64□□□□□ -0.07
CUBNO60494 AC106028.4-201ENST00000614509 607 ntBASIC14.64□□□□□ -0.07
CUBNO60494 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUBNO60494 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUBNO60494 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.64□□□□□ -0.07
CUBNO60494 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.64□□□□□ -0.07
CUBNO60494 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.64□□□□□ -0.07
CUBNO60494 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.64□□□□□ -0.07
CUBNO60494 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUBNO60494 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUBNO60494 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.64□□□□□ -0.07
CUBNO60494 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CUBNO60494 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.64□□□□□ -0.07
CUBNO60494 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CUBNO60494 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.64□□□□□ -0.07
CUBNO60494 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CUBNO60494 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.63□□□□□ -0.07
CUBNO60494 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.63□□□□□ -0.07
CUBNO60494 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CUBNO60494 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUBNO60494 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUBNO60494 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUBNO60494 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
CUBNO60494 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUBNO60494 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUBNO60494 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUBNO60494 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.63□□□□□ -0.07
CUBNO60494 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.63□□□□□ -0.07
CUBNO60494 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUBNO60494 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CUBNO60494 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUBNO60494 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CUBNO60494 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.63□□□□□ -0.07
CUBNO60494 AC009947.1-201ENST00000444350 727 ntBASIC14.63□□□□□ -0.07
CUBNO60494 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.63□□□□□ -0.07
CUBNO60494 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.63□□□□□ -0.07
CUBNO60494 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.63□□□□□ -0.07
CUBNO60494 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CUBNO60494 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUBNO60494 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.63□□□□□ -0.07
CUBNO60494 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CUBNO60494 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CUBNO60494 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 RBM17P3-201ENST00000417687 1192 ntBASIC14.62□□□□□ -0.07
CUBNO60494 AC002347.1-201ENST00000569543 541 ntBASIC14.62□□□□□ -0.07
CUBNO60494 MTDHP5-201ENST00000598980 586 ntBASIC14.62□□□□□ -0.07
CUBNO60494 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.62□□□□□ -0.07
CUBNO60494 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CUBNO60494 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.62□□□□□ -0.07
CUBNO60494 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.62□□□□□ -0.07
CUBNO60494 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
CUBNO60494 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.62□□□□□ -0.07
CUBNO60494 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.62□□□□□ -0.07
CUBNO60494 KRT89P-201ENST00000620027 1478 ntBASIC14.62□□□□□ -0.07
CUBNO60494 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 AL049812.1-201ENST00000432563 2267 ntBASIC14.62□□□□□ -0.07
CUBNO60494 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CUBNO60494 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.62□□□□□ -0.07
CUBNO60494 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CUBNO60494 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.62□□□□□ -0.07
CUBNO60494 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.62□□□□□ -0.07
CUBNO60494 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.62□□□□□ -0.07
CUBNO60494 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.62□□□□□ -0.07
CUBNO60494 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.62□□□□□ -0.07
CUBNO60494 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.62□□□□□ -0.07
CUBNO60494 MIR1199-201ENST00000621445 119 ntBASIC14.62□□□□□ -0.07
CUBNO60494 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 IRX1P1-201ENST00000438849 1838 ntBASIC14.62□□□□□ -0.07
CUBNO60494 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUBNO60494 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.61□□□□□ -0.07
CUBNO60494 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUBNO60494 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUBNO60494 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CUBNO60494 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.61□□□□□ -0.07
CUBNO60494 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.61□□□□□ -0.07
CUBNO60494 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUBNO60494 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CUBNO60494 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CUBNO60494 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CUBNO60494 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms