Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
IDH3BO43837 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
IDH3BO43837 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.88■□□□□ 0.29
IDH3BO43837 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.88■□□□□ 0.29
IDH3BO43837 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3BO43837 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3BO43837 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
IDH3BO43837 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3BO43837 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.88■□□□□ 0.29
IDH3BO43837 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.88■□□□□ 0.29
IDH3BO43837 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3BO43837 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
IDH3BO43837 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.87■□□□□ 0.29
IDH3BO43837 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.87■□□□□ 0.29
IDH3BO43837 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.87■□□□□ 0.29
IDH3BO43837 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
IDH3BO43837 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.87■□□□□ 0.29
IDH3BO43837 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.87■□□□□ 0.29
IDH3BO43837 ESRRAP1-201ENST00000400596 1257 ntBASIC16.87■□□□□ 0.29
IDH3BO43837 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.87■□□□□ 0.29
IDH3BO43837 AC004980.1-204ENST00000429707 299 ntBASIC16.87■□□□□ 0.29
IDH3BO43837 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.87■□□□□ 0.29
IDH3BO43837 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.87■□□□□ 0.29
IDH3BO43837 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.87■□□□□ 0.29
IDH3BO43837 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.87■□□□□ 0.29
IDH3BO43837 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.87■□□□□ 0.29
IDH3BO43837 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.87■□□□□ 0.29
IDH3BO43837 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3BO43837 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.87■□□□□ 0.29
IDH3BO43837 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.87■□□□□ 0.29
IDH3BO43837 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 MTMR9LP-203ENST00000426597 1545 ntBASIC16.86■□□□□ 0.29
IDH3BO43837 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.86■□□□□ 0.29
IDH3BO43837 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
IDH3BO43837 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.86■□□□□ 0.29
IDH3BO43837 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.86■□□□□ 0.29
IDH3BO43837 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.86■□□□□ 0.29
IDH3BO43837 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 AL353807.1-201ENST00000427475 662 ntBASIC16.86■□□□□ 0.29
IDH3BO43837 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.86■□□□□ 0.29
IDH3BO43837 AP002982.1-201ENST00000492365 877 ntBASIC16.86■□□□□ 0.29
IDH3BO43837 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.86■□□□□ 0.29
IDH3BO43837 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
IDH3BO43837 KRT18P6-201ENST00000555540 1265 ntBASIC16.86■□□□□ 0.29
IDH3BO43837 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
IDH3BO43837 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.86■□□□□ 0.29
IDH3BO43837 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 SIRPAP1-201ENST00000448467 1770 ntBASIC16.86■□□□□ 0.29
IDH3BO43837 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.86■□□□□ 0.29
IDH3BO43837 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
IDH3BO43837 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 AC112777.1-201ENST00000540175 1423 ntBASIC16.86■□□□□ 0.29
IDH3BO43837 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
IDH3BO43837 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IDH3BO43837 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
IDH3BO43837 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.85■□□□□ 0.29
IDH3BO43837 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
IDH3BO43837 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IDH3BO43837 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IDH3BO43837 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
IDH3BO43837 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IDH3BO43837 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.85■□□□□ 0.29
IDH3BO43837 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IDH3BO43837 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
IDH3BO43837 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms