Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.66■□□□□ 0.58
RIPK2O43353 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RIPK2O43353 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
RIPK2O43353 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 MIR564-202ENST00000385049 94 ntBASIC18.66■□□□□ 0.58
RIPK2O43353 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RIPK2O43353 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RIPK2O43353 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RIPK2O43353 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.66■□□□□ 0.58
RIPK2O43353 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.65■□□□□ 0.58
RIPK2O43353 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RIPK2O43353 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RIPK2O43353 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.65■□□□□ 0.58
RIPK2O43353 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 AC084018.2-201ENST00000613093 2607 ntBASIC18.65■□□□□ 0.58
RIPK2O43353 AD000864.1-201ENST00000624076 2295 ntBASIC18.65■□□□□ 0.58
RIPK2O43353 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 AC004951.3-201ENST00000418645 1148 ntBASIC18.65■□□□□ 0.58
RIPK2O43353 NIFKP9-201ENST00000419265 221 ntBASIC18.65■□□□□ 0.58
RIPK2O43353 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.65■□□□□ 0.58
RIPK2O43353 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 AC233263.1-201ENST00000578059 224 ntBASIC18.65■□□□□ 0.58
RIPK2O43353 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
RIPK2O43353 AL023875.1-201ENST00000640777 796 ntBASIC18.65■□□□□ 0.58
RIPK2O43353 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.65■□□□□ 0.58
RIPK2O43353 KRT8P50-201ENST00000562022 1438 ntBASIC18.65■□□□□ 0.58
RIPK2O43353 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIPK2O43353 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RIPK2O43353 AC124067.4-201ENST00000519691 2379 ntBASIC18.64■□□□□ 0.58
RIPK2O43353 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RIPK2O43353 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
RIPK2O43353 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
RIPK2O43353 AC099343.3-201ENST00000605834 2503 ntBASIC18.64■□□□□ 0.57
RIPK2O43353 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RIPK2O43353 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 KRASP1-201ENST00000407852 552 ntBASIC18.64■□□□□ 0.57
RIPK2O43353 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.64■□□□□ 0.57
RIPK2O43353 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.64■□□□□ 0.57
RIPK2O43353 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.64■□□□□ 0.57
RIPK2O43353 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.64■□□□□ 0.57
RIPK2O43353 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.64■□□□□ 0.57
RIPK2O43353 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
RIPK2O43353 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RIPK2O43353 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.64■□□□□ 0.57
RIPK2O43353 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.64■□□□□ 0.57
RIPK2O43353 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.64■□□□□ 0.57
RIPK2O43353 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.64■□□□□ 0.57
RIPK2O43353 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPK2O43353 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.64■□□□□ 0.57
RIPK2O43353 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RIPK2O43353 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RIPK2O43353 KRT18P55-202ENST00000578578 1546 ntBASIC18.64■□□□□ 0.57
RIPK2O43353 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RIPK2O43353 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIPK2O43353 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIPK2O43353 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIPK2O43353 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIPK2O43353 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIPK2O43353 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RIPK2O43353 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RIPK2O43353 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RIPK2O43353 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIPK2O43353 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms