Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PAX4O43316 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.12□□□□□ -0.31
PAX4O43316 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.12□□□□□ -0.31
PAX4O43316 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.12□□□□□ -0.31
PAX4O43316 AL357033.4-201ENST00000617703 1807 ntBASIC13.12□□□□□ -0.31
PAX4O43316 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
PAX4O43316 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.12□□□□□ -0.31
PAX4O43316 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.12□□□□□ -0.31
PAX4O43316 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.12□□□□□ -0.31
PAX4O43316 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.12□□□□□ -0.31
PAX4O43316 MIR3180-5-201ENST00000583743 153 ntBASIC13.12□□□□□ -0.31
PAX4O43316 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.12□□□□□ -0.31
PAX4O43316 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
PAX4O43316 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.12□□□□□ -0.31
PAX4O43316 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
PAX4O43316 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.12□□□□□ -0.31
PAX4O43316 AL031598.1-201ENST00000561511 1773 ntBASIC13.12□□□□□ -0.31
PAX4O43316 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.12□□□□□ -0.31
PAX4O43316 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PAX4O43316 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PAX4O43316 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.11□□□□□ -0.31
PAX4O43316 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.11□□□□□ -0.31
PAX4O43316 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.11□□□□□ -0.31
PAX4O43316 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
PAX4O43316 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PAX4O43316 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.11□□□□□ -0.31
PAX4O43316 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 ECEL1P2-202ENST00000465689 757 ntBASIC13.11□□□□□ -0.31
PAX4O43316 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PAX4O43316 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.11□□□□□ -0.31
PAX4O43316 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.11□□□□□ -0.31
PAX4O43316 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
PAX4O43316 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PAX4O43316 AC133561.5-201ENST00000635547 218 ntBASIC13.11□□□□□ -0.31
PAX4O43316 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PAX4O43316 MTMR9LP-203ENST00000426597 1545 ntBASIC13.11□□□□□ -0.31
PAX4O43316 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PAX4O43316 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PAX4O43316 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.11□□□□□ -0.31
PAX4O43316 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.11□□□□□ -0.31
PAX4O43316 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.11□□□□□ -0.31
PAX4O43316 AC036111.1-201ENST00000533973 1582 ntBASIC13.11□□□□□ -0.31
PAX4O43316 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.11□□□□□ -0.31
PAX4O43316 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PAX4O43316 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
PAX4O43316 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
PAX4O43316 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.1□□□□□ -0.31
PAX4O43316 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
PAX4O43316 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.1□□□□□ -0.31
PAX4O43316 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.1□□□□□ -0.31
PAX4O43316 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 MIR564-202ENST00000385049 94 ntBASIC13.1□□□□□ -0.31
PAX4O43316 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 HMGA1P5-201ENST00000412453 271 ntBASIC13.1□□□□□ -0.31
PAX4O43316 LIN28AP1-201ENST00000429574 405 ntBASIC13.1□□□□□ -0.31
PAX4O43316 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PAX4O43316 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.1□□□□□ -0.31
PAX4O43316 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.1□□□□□ -0.31
PAX4O43316 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.1□□□□□ -0.31
PAX4O43316 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms