Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.52■□□□□ 0.4
RTCAO00442 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RTCAO00442 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RTCAO00442 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.52■□□□□ 0.4
RTCAO00442 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTCAO00442 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.52■□□□□ 0.4
RTCAO00442 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.52■□□□□ 0.4
RTCAO00442 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.52■□□□□ 0.4
RTCAO00442 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.52■□□□□ 0.4
RTCAO00442 NEK4P2-201ENST00000580004 1012 ntBASIC17.52■□□□□ 0.4
RTCAO00442 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.52■□□□□ 0.4
RTCAO00442 AC010240.3-201ENST00000607688 395 ntBASIC17.52■□□□□ 0.4
RTCAO00442 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.52■□□□□ 0.4
RTCAO00442 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RTCAO00442 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTCAO00442 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RTCAO00442 AL354751.1-201ENST00000412768 1863 ntBASIC17.52■□□□□ 0.39
RTCAO00442 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTCAO00442 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RTCAO00442 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RTCAO00442 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 AC009102.3-201ENST00000623118 1491 ntBASIC17.51■□□□□ 0.39
RTCAO00442 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.51■□□□□ 0.39
RTCAO00442 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.51■□□□□ 0.39
RTCAO00442 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.51■□□□□ 0.39
RTCAO00442 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.51■□□□□ 0.39
RTCAO00442 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RTCAO00442 AC073508.3-201ENST00000619697 1419 ntBASIC17.51■□□□□ 0.39
RTCAO00442 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.51■□□□□ 0.39
RTCAO00442 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.51■□□□□ 0.39
RTCAO00442 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RTCAO00442 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTCAO00442 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.51■□□□□ 0.39
RTCAO00442 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.51■□□□□ 0.39
RTCAO00442 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RTCAO00442 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.5■□□□□ 0.39
RTCAO00442 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RTCAO00442 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.5■□□□□ 0.39
RTCAO00442 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RTCAO00442 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RTCAO00442 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RTCAO00442 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 MIR149-201ENST00000384879 89 ntBASIC17.5■□□□□ 0.39
RTCAO00442 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.5■□□□□ 0.39
RTCAO00442 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.5■□□□□ 0.39
RTCAO00442 GCSHP2-201ENST00000560971 527 ntBASIC17.5■□□□□ 0.39
RTCAO00442 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms