Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 EXOC3-AS1-202ENST00000623673 1663 ntBASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 ABALON-201ENST00000629058 1903 ntBASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
CHKB-CPT1BH3BT56 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 GNAS-203ENST00000306120 1878 ntBASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 ZNRF2P2-203ENST00000454624 420 ntBASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 SPCS2P3-201ENST00000500401 656 ntBASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 BID-213ENST00000615414 2236 ntTSL 5 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 ING5-213ENST00000636051 4199 ntTSL 5 BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
CHKB-CPT1BH3BT56 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 DMBT1P1-203ENST00000636837 4628 ntBASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 DPP3P2-201ENST00000416030 1696 ntBASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 CD37-204ENST00000535669 1674 ntTSL 2 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 LINC02228-204ENST00000642115 2962 ntBASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 AGK-211ENST00000629555 2765 ntTSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms