Protein–RNA interactions for Protein: B8ZZ34

SHISA8, Putative protein shisa-8, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA8B8ZZ34 MIR149-201ENST00000384879 89 ntBASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 VENTXP5-201ENST00000523979 775 ntBASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 LINC01238-205ENST00000567549 1107 ntBASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 AC083849.1-201ENST00000615227 514 ntBASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHISA8B8ZZ34 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 AL391807.1-203ENST00000604392 2365 ntBASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 AL031133.1-201ENST00000406807 723 ntBASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 AL136038.4-201ENST00000603606 1261 ntBASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 AC073592.3-201ENST00000625118 1834 ntBASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SHISA8B8ZZ34 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 NEFHP1-201ENST00000412845 2629 ntBASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 SPDYE13P-201ENST00000445314 798 ntBASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 AC090164.3-201ENST00000610780 2143 ntBASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 ESPNP-201ENST00000270691 2015 ntBASIC16.62■□□□□ 0.25
SHISA8B8ZZ34 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 HBZP1-201ENST00000354915 429 ntBASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA8B8ZZ34 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms