Protein–RNA interactions for Protein: A0A1B0GTC6

C3orf85, Chromosome 3 open reading frame 85, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf85A0A1B0GTC6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf85A0A1B0GTC6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf85A0A1B0GTC6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C3orf85A0A1B0GTC6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 AL445675.2-201ENST00000620291 557 ntBASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 AC133041.1-202ENST00000642053 222 ntBASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 AL645608.8-201ENST00000606034 2086 ntBASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 AC009053.2-201ENST00000563701 2365 ntBASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf85A0A1B0GTC6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf85A0A1B0GTC6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf85A0A1B0GTC6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
C3orf85A0A1B0GTC6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf85A0A1B0GTC6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.14■□□□□ 0.01
C3orf85A0A1B0GTC6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf85A0A1B0GTC6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf85A0A1B0GTC6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf85A0A1B0GTC6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms