Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 KRT16P1-201ENST00000399124 1418 ntBASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RNF103-CHMP3A0A140T963 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 HEIH-201ENST00000623091 1652 ntBASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 RPPH1-201ENST00000516869 333 ntBASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF103-CHMP3A0A140T963 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.71■□□□□ 0.42
RNF103-CHMP3A0A140T963 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF103-CHMP3A0A140T963 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.71■□□□□ 0.42
RNF103-CHMP3A0A140T963 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC004951.3-201ENST00000418645 1148 ntBASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC091390.4-202ENST00000476426 537 ntBASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF103-CHMP3A0A140T963 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC026271.3-201ENST00000571884 352 ntBASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 CR392000.1-201ENST00000624770 1228 ntBASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms