Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 FAM197Y1-201ENST00000421178 764 ntBASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 MCCD1P1-208ENST00000445732 328 ntBASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 AC018470.1-201ENST00000624790 3129 ntBASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV30A0A087WSZ9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV30A0A087WSZ9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TRAV30A0A087WSZ9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.46□□□□□ -0.1
TRAV30A0A087WSZ9 AL499627.1-201ENST00000569373 2188 ntBASIC14.46□□□□□ -0.1
TRAV30A0A087WSZ9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV30A0A087WSZ9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.46□□□□□ -0.1
TRAV30A0A087WSZ9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 UBE2SP1-201ENST00000450587 669 ntBASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 AC116562.2-201ENST00000507042 360 ntBASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 SLC25A1P4-201ENST00000567977 778 ntBASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAV30A0A087WSZ9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 AC034236.2-201ENST00000606662 1610 ntBASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 MIR564-202ENST00000385049 94 ntBASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 NUDT16P1-203ENST00000513809 620 ntBASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 AC142381.4-202ENST00000563973 229 ntBASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV30A0A087WSZ9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms