Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV18A0A075B6X5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV18A0A075B6X5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV18A0A075B6X5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV18A0A075B6X5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV18A0A075B6X5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 AC108860.2-201ENST00000562760 2183 ntBASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 CDCA4P2-201ENST00000441182 718 ntBASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 AC026185.1-201ENST00000445748 174 ntBASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 AC083906.2-201ENST00000511578 360 ntBASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 PRKY-204ENST00000533551 1019 ntBASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.8■□□□□ 0.12
TRAV18A0A075B6X5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 NBPF21P-201ENST00000425093 1451 ntBASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 KRT8P11-201ENST00000409686 1436 ntBASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 AL162430.1-201ENST00000480705 870 ntBASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV18A0A075B6X5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 AL096828.2-201ENST00000567259 1965 ntBASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms