Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 AC006116.8-202ENST00000587620 1550 ntBASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRAV7A0A075B6U4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 AC093677.2-201ENST00000600169 1863 ntBASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
TRAV7A0A075B6U4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRAV7A0A075B6U4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms