Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC092338.2-201ENST00000568827 1415 ntBASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 TSPY15P-201ENST00000457163 923 ntBASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 AC128688.1-201ENST00000487626 519 ntBASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 MIR3180-5-201ENST00000583743 153 ntBASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 AC010653.2-201ENST00000623505 997 ntBASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
HLA-DRB4X5D2U9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 AP003041.3-201ENST00000527151 707 ntBASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DRB4X5D2U9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
HLA-DRB4X5D2U9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.83□□□□□ -0.19
HLA-DRB4X5D2U9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DRB4X5D2U9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.83□□□□□ -0.19
HLA-DRB4X5D2U9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
HLA-DRB4X5D2U9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.83□□□□□ -0.19
HLA-DRB4X5D2U9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
HLA-DRB4X5D2U9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
HLA-DRB4X5D2U9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 AC112777.1-201ENST00000540175 1423 ntBASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 MIR564-202ENST00000385049 94 ntBASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 AC007663.1-201ENST00000438948 1240 ntBASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DRB4X5D2U9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms