Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC134043.2-201ENST00000624206 2238 ntBASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
R3HCC1Q9Y3T6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 RPS2P55-201ENST00000397318 883 ntBASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 AC012618.2-201ENST00000428058 849 ntBASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 AC107956.1-201ENST00000494359 873 ntBASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
R3HCC1Q9Y3T6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 AC135776.1-201ENST00000319817 2481 ntBASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.03■□□□□ 0.96
R3HCC1Q9Y3T6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 PKD1P1-201ENST00000458669 6805 ntBASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 OR6D1P-202ENST00000641007 5290 ntBASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 C1QL1P1-201ENST00000568105 661 ntBASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 AF186192.3-201ENST00000583427 947 ntBASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.02■□□□□ 0.96
R3HCC1Q9Y3T6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.02■□□□□ 0.95
R3HCC1Q9Y3T6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.02■□□□□ 0.95
R3HCC1Q9Y3T6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.02■□□□□ 0.95
R3HCC1Q9Y3T6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms