Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC107956.1-201ENST00000494359 873 ntBASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 AL162741.1-201ENST00000565563 1558 ntBASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 Z85996.1-201ENST00000494644 937 ntBASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 AC026271.3-201ENST00000571884 352 ntBASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 CD177P1-201ENST00000606252 935 ntBASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 IRX1P1-201ENST00000438849 1838 ntBASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 KRT8P41-201ENST00000533985 1514 ntBASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 AC012317.2-201ENST00000623305 2251 ntBASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.47□□□□□ -0.25
HHLA3Q9XRX5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 MIR718-201ENST00000390190 70 ntBASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 AC004951.3-201ENST00000418645 1148 ntBASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 FAM197Y1-201ENST00000421178 764 ntBASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 AC080080.1-201ENST00000625121 2420 ntBASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
HHLA3Q9XRX5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HHLA3Q9XRX5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
HHLA3Q9XRX5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HHLA3Q9XRX5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HHLA3Q9XRX5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.46□□□□□ -0.26
HHLA3Q9XRX5 PKD1P1-201ENST00000458669 6805 ntBASIC13.46□□□□□ -0.26
HHLA3Q9XRX5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HHLA3Q9XRX5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms