Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 KRASP1-201ENST00000407852 552 ntBASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 AC004951.3-201ENST00000418645 1148 ntBASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 AP003097.1-201ENST00000530657 1135 ntBASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 AC012317.2-201ENST00000623305 2251 ntBASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SAMD4AQ9UPU9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 CKBP1-201ENST00000565489 1086 ntBASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 AC142086.2-201ENST00000569753 217 ntBASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 AL023875.1-201ENST00000640777 796 ntBASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SAMD4AQ9UPU9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.21■□□□□ 0.34
SAMD4AQ9UPU9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SAMD4AQ9UPU9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 AC139713.2-201ENST00000641328 2723 ntBASIC17.2■□□□□ 0.34
SAMD4AQ9UPU9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SAMD4AQ9UPU9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SAMD4AQ9UPU9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms