Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 GMCL1P1-201ENST00000463439 1581 ntBASIC19.08■□□□□ 0.65
AP4E1Q9UPM8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 AL023973.1-201ENST00000624619 620 ntBASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP4E1Q9UPM8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 AC093677.2-201ENST00000600169 1863 ntBASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 AC005521.1-201ENST00000393351 872 ntBASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 AC092865.7-201ENST00000641832 219 ntBASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 ABALON-201ENST00000629058 1903 ntBASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AP4E1Q9UPM8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 MIR3917-201ENST00000580971 93 ntBASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 AC073508.3-201ENST00000619697 1419 ntBASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4E1Q9UPM8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 KRT18P57-201ENST00000443599 1254 ntBASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 GCSHP2-201ENST00000560971 527 ntBASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4E1Q9UPM8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms