Protein–RNA interactions for Protein: Q9UHF7

TRPS1, Zinc finger transcription factor Trps1, humanhuman

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1Q9UHF7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 BX088651.1-201ENST00000540551 451 ntBASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 AC116562.4-202ENST00000641738 218 ntBASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.77■□□□□ 0.44
TRPS1Q9UHF7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 FLJ13224-201ENST00000313737 1514 ntBASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
TRPS1Q9UHF7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 AL390955.1-201ENST00000428694 934 ntBASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 C2orf69P3-201ENST00000565542 1120 ntBASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 LETM1P2-201ENST00000597330 2178 ntBASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.76■□□□□ 0.43
TRPS1Q9UHF7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 AC007663.1-201ENST00000438948 1240 ntBASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRPS1Q9UHF7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms