Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 ECEL1P3-201ENST00000427961 737 ntBASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 AC009947.2-201ENST00000444014 672 ntBASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 AC112497.1-201ENST00000624824 639 ntBASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.77■□□□□ 0.28
CHRNA9Q9UGM1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHRNA9Q9UGM1 KRT8P50-201ENST00000562022 1438 ntBASIC16.77■□□□□ 0.27
CHRNA9Q9UGM1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHRNA9Q9UGM1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.77■□□□□ 0.27
CHRNA9Q9UGM1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.77■□□□□ 0.27
CHRNA9Q9UGM1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CHRNA9Q9UGM1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHRNA9Q9UGM1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHRNA9Q9UGM1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHRNA9Q9UGM1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 AC005332.8-201ENST00000622750 2735 ntBASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 AC068880.1-201ENST00000507289 2297 ntBASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 AP000523.1-201ENST00000398242 1049 ntBASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 LIN28AP1-201ENST00000429574 405 ntBASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 NEK4P2-201ENST00000580004 1012 ntBASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 LINC01023-201ENST00000606054 436 ntBASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 AC005363.2-201ENST00000618631 242 ntBASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CHRNA9Q9UGM1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 AC113347.1-201ENST00000413321 391 ntBASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 AC211429.1-201ENST00000415277 523 ntBASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 ATP5G1P1-201ENST00000448724 379 ntBASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA9Q9UGM1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms