Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.59■□□□□ 0.73
CISHQ9NSE2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CISHQ9NSE2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.59■□□□□ 0.73
CISHQ9NSE2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.59■□□□□ 0.73
CISHQ9NSE2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.59■□□□□ 0.73
CISHQ9NSE2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.59■□□□□ 0.73
CISHQ9NSE2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.59■□□□□ 0.73
CISHQ9NSE2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 BICD1-207ENST00000551848 1962 ntBASIC19.59■□□□□ 0.73
CISHQ9NSE2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CISHQ9NSE2 AC135776.1-201ENST00000319817 2481 ntBASIC19.59■□□□□ 0.73
CISHQ9NSE2 AL024508.2-201ENST00000607749 1894 ntBASIC19.58■□□□□ 0.73
CISHQ9NSE2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CISHQ9NSE2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CISHQ9NSE2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CISHQ9NSE2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CISHQ9NSE2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CISHQ9NSE2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.58■□□□□ 0.73
CISHQ9NSE2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.58■□□□□ 0.73
CISHQ9NSE2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CISHQ9NSE2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CISHQ9NSE2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CISHQ9NSE2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CISHQ9NSE2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CISHQ9NSE2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CISHQ9NSE2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.58■□□□□ 0.72
CISHQ9NSE2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.58■□□□□ 0.72
CISHQ9NSE2 AC092597.1-201ENST00000487352 616 ntBASIC19.58■□□□□ 0.72
CISHQ9NSE2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.58■□□□□ 0.72
CISHQ9NSE2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CISHQ9NSE2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.58■□□□□ 0.72
CISHQ9NSE2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.58■□□□□ 0.72
CISHQ9NSE2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CISHQ9NSE2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CISHQ9NSE2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CISHQ9NSE2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.58■□□□□ 0.72
CISHQ9NSE2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CISHQ9NSE2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.58■□□□□ 0.72
CISHQ9NSE2 LINC01126-201ENST00000623515 1646 ntBASIC19.58■□□□□ 0.72
CISHQ9NSE2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.58■□□□□ 0.72
CISHQ9NSE2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 AL391807.1-203ENST00000604392 2365 ntBASIC19.57■□□□□ 0.72
CISHQ9NSE2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 AC093677.2-201ENST00000600169 1863 ntBASIC19.57■□□□□ 0.72
CISHQ9NSE2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 AL049597.2-201ENST00000565575 961 ntBASIC19.57■□□□□ 0.72
CISHQ9NSE2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 AL162741.1-201ENST00000565563 1558 ntBASIC19.57■□□□□ 0.72
CISHQ9NSE2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CISHQ9NSE2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CISHQ9NSE2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CISHQ9NSE2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CISHQ9NSE2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CISHQ9NSE2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CISHQ9NSE2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CISHQ9NSE2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CISHQ9NSE2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CISHQ9NSE2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CISHQ9NSE2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.56■□□□□ 0.72
CISHQ9NSE2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.56■□□□□ 0.72
CISHQ9NSE2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CISHQ9NSE2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CISHQ9NSE2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.56■□□□□ 0.72
CISHQ9NSE2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CISHQ9NSE2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CISHQ9NSE2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.56■□□□□ 0.72
CISHQ9NSE2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CISHQ9NSE2 AC112907.2-201ENST00000448639 330 ntBASIC19.56■□□□□ 0.72
CISHQ9NSE2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms