Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 AL445228.2-201ENST00000605589 952 ntBASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 AL157888.1-201ENST00000631930 593 ntBASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 BICD1-207ENST00000551848 1962 ntBASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PRDM9Q9NQV7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 AC112907.2-201ENST00000448639 330 ntBASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 AC087388.1-201ENST00000571370 1112 ntBASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 AC008687.5-201ENST00000593746 558 ntBASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.35■□□□□ 0.37
PRDM9Q9NQV7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 ARMC10P1-201ENST00000313754 855 ntBASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 SDHAP2-201ENST00000455183 2001 ntBASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 AL671277.2-201ENST00000458060 996 ntBASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 AC009113.1-201ENST00000570267 2443 ntBASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRDM9Q9NQV7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRDM9Q9NQV7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRDM9Q9NQV7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRDM9Q9NQV7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRDM9Q9NQV7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRDM9Q9NQV7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.33■□□□□ 0.37
PRDM9Q9NQV7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms