Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NLRC4Q9NPP4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NLRC4Q9NPP4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 AP000593.1-201ENST00000393668 712 ntBASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 MIR3180-5-201ENST00000583743 153 ntBASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NLRC4Q9NPP4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 TSPY7P-201ENST00000431358 1114 ntBASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.93■□□□□ 0.78
NLRC4Q9NPP4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 AP005242.2-201ENST00000580065 1175 ntBASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NLRC4Q9NPP4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 AC138028.4-201ENST00000564984 1845 ntBASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 RBM17P1-201ENST00000453646 1190 ntBASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 AC008550.1-201ENST00000511500 884 ntBASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.91■□□□□ 0.78
NLRC4Q9NPP4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms