Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
PIF1Q9H611 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PIF1Q9H611 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.58■□□□□ 0.4
PIF1Q9H611 AC233263.1-201ENST00000578059 224 ntBASIC17.58■□□□□ 0.4
PIF1Q9H611 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PIF1Q9H611 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.58■□□□□ 0.4
PIF1Q9H611 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.58■□□□□ 0.4
PIF1Q9H611 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PIF1Q9H611 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PIF1Q9H611 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PIF1Q9H611 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PIF1Q9H611 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.57■□□□□ 0.4
PIF1Q9H611 AC112777.1-201ENST00000540175 1423 ntBASIC17.57■□□□□ 0.4
PIF1Q9H611 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PIF1Q9H611 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
PIF1Q9H611 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.57■□□□□ 0.4
PIF1Q9H611 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PIF1Q9H611 AC138028.4-201ENST00000564984 1845 ntBASIC17.57■□□□□ 0.4
PIF1Q9H611 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 FAM201B-201ENST00000458407 597 ntBASIC17.57■□□□□ 0.4
PIF1Q9H611 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.57■□□□□ 0.4
PIF1Q9H611 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.57■□□□□ 0.4
PIF1Q9H611 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
PIF1Q9H611 AL023875.1-201ENST00000640777 796 ntBASIC17.57■□□□□ 0.4
PIF1Q9H611 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PIF1Q9H611 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.57■□□□□ 0.4
PIF1Q9H611 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.57■□□□□ 0.4
PIF1Q9H611 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
PIF1Q9H611 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PIF1Q9H611 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.56■□□□□ 0.4
PIF1Q9H611 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.56■□□□□ 0.4
PIF1Q9H611 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.56■□□□□ 0.4
PIF1Q9H611 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 AC020916.1-201ENST00000587762 1774 ntBASIC17.56■□□□□ 0.4
PIF1Q9H611 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.56■□□□□ 0.4
PIF1Q9H611 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.56■□□□□ 0.4
PIF1Q9H611 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.56■□□□□ 0.4
PIF1Q9H611 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.56■□□□□ 0.4
PIF1Q9H611 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.56■□□□□ 0.4
PIF1Q9H611 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.56■□□□□ 0.4
PIF1Q9H611 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.56■□□□□ 0.4
PIF1Q9H611 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.56■□□□□ 0.4
PIF1Q9H611 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.56■□□□□ 0.4
PIF1Q9H611 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.56■□□□□ 0.4
PIF1Q9H611 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.56■□□□□ 0.4
PIF1Q9H611 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.56■□□□□ 0.4
PIF1Q9H611 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.56■□□□□ 0.4
PIF1Q9H611 MTDHP1-201ENST00000605323 784 ntBASIC17.56■□□□□ 0.4
PIF1Q9H611 AC069544.1-201ENST00000609399 999 ntBASIC17.56■□□□□ 0.4
PIF1Q9H611 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 MYC-208ENST00000641036 567 ntBASIC17.56■□□□□ 0.4
PIF1Q9H611 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.56■□□□□ 0.4
PIF1Q9H611 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.56■□□□□ 0.4
PIF1Q9H611 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PIF1Q9H611 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIF1Q9H611 GNAS-203ENST00000306120 1878 ntBASIC17.56■□□□□ 0.4
PIF1Q9H611 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms