Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 HOXB1-202ENST00000577092 1414 ntBASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PHACTR1Q9C0D0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHACTR1Q9C0D0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHACTR1Q9C0D0 AL163051.1-201ENST00000569214 1512 ntBASIC18.64■□□□□ 0.58
PHACTR1Q9C0D0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHACTR1Q9C0D0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHACTR1Q9C0D0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHACTR1Q9C0D0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 KRT8P7-201ENST00000533003 1432 ntBASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.64■□□□□ 0.57
PHACTR1Q9C0D0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 AL139384.1-201ENST00000612143 3047 ntBASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 AC036111.1-201ENST00000533973 1582 ntBASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHACTR1Q9C0D0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHACTR1Q9C0D0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms