Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 AC027612.3-201ENST00000413684 1047 ntBASIC14.92□□□□□ -0.02
NKX6-2Q9C056 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 AL136967.2-201ENST00000623968 743 ntBASIC14.92□□□□□ -0.02
NKX6-2Q9C056 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.92□□□□□ -0.02
NKX6-2Q9C056 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX6-2Q9C056 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.91□□□□□ -0.02
NKX6-2Q9C056 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NKX6-2Q9C056 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 AC096631.2-201ENST00000436136 790 ntBASIC14.9□□□□□ -0.02
NKX6-2Q9C056 AC100791.3-201ENST00000617619 330 ntBASIC14.9□□□□□ -0.02
NKX6-2Q9C056 MIR6084-201ENST00000622012 110 ntBASIC14.9□□□□□ -0.02
NKX6-2Q9C056 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 AC023824.1-201ENST00000562945 2975 ntBASIC14.9□□□□□ -0.02
NKX6-2Q9C056 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NKX6-2Q9C056 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms