Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 AC008403.3-201ENST00000598924 454 ntBASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFAF3Q9BU61 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFAF3Q9BU61 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 AC005052.1-201ENST00000625181 2492 ntBASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 UBE2SP1-201ENST00000450587 669 ntBASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 C1QBPP2-201ENST00000528754 825 ntBASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFAF3Q9BU61 AC134043.2-201ENST00000624206 2238 ntBASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 Z98044.1-201ENST00000632503 1764 ntBASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms