Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRDL1Q9BU40 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 AC068880.1-201ENST00000507289 2297 ntBASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 AC012618.2-201ENST00000428058 849 ntBASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 CKBP1-201ENST00000565489 1086 ntBASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 AC113410.3-201ENST00000623366 203 ntBASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 AL049637.2-201ENST00000641778 930 ntBASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRDL1Q9BU40 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 AC233702.5-201ENST00000584107 538 ntBASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 TMEM191A-211ENST00000637163 1067 ntBASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 ANO7L1-203ENST00000602586 1720 ntBASIC14.61□□□□□ -0.07
CHRDL1Q9BU40 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 NUDT16P1-203ENST00000513809 620 ntBASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.6□□□□□ -0.07
CHRDL1Q9BU40 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms