Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
CCM2Q9BSQ5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 PVRIG2P-201ENST00000435460 978 ntBASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 AC090164.3-201ENST00000610780 2143 ntBASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2Q9BSQ5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 AC112907.2-201ENST00000448639 330 ntBASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 AC099343.3-201ENST00000605834 2503 ntBASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.06■□□□□ 0.48
CCM2Q9BSQ5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 AC079602.3-201ENST00000623931 403 ntBASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.05■□□□□ 0.48
CCM2Q9BSQ5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms