Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.24□□□□□ -0.45
LITAFQ99732 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
LITAFQ99732 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LITAFQ99732 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LITAFQ99732 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LITAFQ99732 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LITAFQ99732 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.23□□□□□ -0.45
LITAFQ99732 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
LITAFQ99732 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.23□□□□□ -0.45
LITAFQ99732 AL596257.1-201ENST00000641463 2694 ntBASIC12.23□□□□□ -0.45
LITAFQ99732 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 JTB-203ENST00000368589 1216 ntTSL 2 BASIC12.23□□□□□ -0.45
LITAFQ99732 BET1L-204ENST00000410108 637 ntTSL 3 BASIC12.23□□□□□ -0.45
LITAFQ99732 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.23□□□□□ -0.45
LITAFQ99732 KRT18P41-201ENST00000518924 1277 ntBASIC12.23□□□□□ -0.45
LITAFQ99732 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC12.23□□□□□ -0.45
LITAFQ99732 AC008694.1-202ENST00000636953 945 ntBASIC12.23□□□□□ -0.45
LITAFQ99732 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.23□□□□□ -0.45
LITAFQ99732 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.23□□□□□ -0.45
LITAFQ99732 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.23□□□□□ -0.45
LITAFQ99732 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LITAFQ99732 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
LITAFQ99732 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.23□□□□□ -0.45
LITAFQ99732 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LITAFQ99732 FLJ38576-201ENST00000623820 2459 ntBASIC12.22□□□□□ -0.45
LITAFQ99732 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.22□□□□□ -0.45
LITAFQ99732 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LITAFQ99732 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LITAFQ99732 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LITAFQ99732 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LITAFQ99732 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LITAFQ99732 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LITAFQ99732 HTR7P1-201ENST00000538670 1336 ntBASIC12.22□□□□□ -0.45
LITAFQ99732 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.22□□□□□ -0.45
LITAFQ99732 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LITAFQ99732 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.22□□□□□ -0.45
LITAFQ99732 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.22□□□□□ -0.45
LITAFQ99732 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 AL160286.2-201ENST00000567150 934 ntBASIC12.22□□□□□ -0.45
LITAFQ99732 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.22□□□□□ -0.45
LITAFQ99732 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.22□□□□□ -0.45
LITAFQ99732 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.22□□□□□ -0.45
LITAFQ99732 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.22□□□□□ -0.45
LITAFQ99732 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
LITAFQ99732 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
LITAFQ99732 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.22□□□□□ -0.45
LITAFQ99732 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.22□□□□□ -0.45
LITAFQ99732 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
LITAFQ99732 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LITAFQ99732 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.21□□□□□ -0.45
LITAFQ99732 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms