Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.35□□□□□ -0.11
TRGV9Q99603 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV9Q99603 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV9Q99603 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV9Q99603 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRGV9Q99603 LINC00896-202ENST00000609602 2128 ntBASIC14.35□□□□□ -0.11
TRGV9Q99603 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRGV9Q99603 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRGV9Q99603 AL096828.2-201ENST00000567259 1965 ntBASIC14.35□□□□□ -0.11
TRGV9Q99603 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.35□□□□□ -0.11
TRGV9Q99603 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRGV9Q99603 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV9Q99603 MESTP1-201ENST00000404287 994 ntBASIC14.35□□□□□ -0.11
TRGV9Q99603 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV9Q99603 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV9Q99603 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.35□□□□□ -0.11
TRGV9Q99603 DGCR10-201ENST00000609839 495 ntBASIC14.35□□□□□ -0.11
TRGV9Q99603 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV9Q99603 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.35□□□□□ -0.11
TRGV9Q99603 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 GPAT2P1-201ENST00000444924 1672 ntBASIC14.35□□□□□ -0.11
TRGV9Q99603 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRGV9Q99603 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRGV9Q99603 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.34□□□□□ -0.11
TRGV9Q99603 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRGV9Q99603 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRGV9Q99603 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.34□□□□□ -0.11
TRGV9Q99603 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 AL135905.2-201ENST00000584934 1404 ntBASIC14.34□□□□□ -0.11
TRGV9Q99603 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.34□□□□□ -0.11
TRGV9Q99603 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.34□□□□□ -0.11
TRGV9Q99603 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRGV9Q99603 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.34□□□□□ -0.11
TRGV9Q99603 CA15P1-201ENST00000481698 905 ntBASIC14.34□□□□□ -0.11
TRGV9Q99603 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.34□□□□□ -0.11
TRGV9Q99603 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRGV9Q99603 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.34□□□□□ -0.11
TRGV9Q99603 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.34□□□□□ -0.11
TRGV9Q99603 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRGV9Q99603 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRGV9Q99603 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.34□□□□□ -0.11
TRGV9Q99603 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRGV9Q99603 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.34□□□□□ -0.11
TRGV9Q99603 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRGV9Q99603 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.34□□□□□ -0.11
TRGV9Q99603 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.34□□□□□ -0.11
TRGV9Q99603 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRGV9Q99603 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.33□□□□□ -0.11
TRGV9Q99603 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV9Q99603 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV9Q99603 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV9Q99603 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV9Q99603 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRGV9Q99603 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.33□□□□□ -0.12
TRGV9Q99603 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV9Q99603 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRGV9Q99603 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.33□□□□□ -0.12
TRGV9Q99603 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.33□□□□□ -0.12
TRGV9Q99603 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRGV9Q99603 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV9Q99603 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRGV9Q99603 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.33□□□□□ -0.12
TRGV9Q99603 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRGV9Q99603 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRGV9Q99603 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.33□□□□□ -0.12
TRGV9Q99603 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms