Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC26.31■■□□□ 1.8
SCAF11Q99590 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF11Q99590 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC26.31■■□□□ 1.8
SCAF11Q99590 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SCAF11Q99590 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SCAF11Q99590 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC26.31■■□□□ 1.8
SCAF11Q99590 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF11Q99590 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC26.3■■□□□ 1.8
SCAF11Q99590 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF11Q99590 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF11Q99590 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
SCAF11Q99590 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC26.3■■□□□ 1.8
SCAF11Q99590 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF11Q99590 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC26.3■■□□□ 1.8
SCAF11Q99590 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC26.3■■□□□ 1.8
SCAF11Q99590 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC26.3■■□□□ 1.8
SCAF11Q99590 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SCAF11Q99590 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF11Q99590 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF11Q99590 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SCAF11Q99590 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCAF11Q99590 RPS2P1-201ENST00000434010 821 ntBASIC26.3■■□□□ 1.8
SCAF11Q99590 DNAJB3-201ENST00000446806 729 ntBASIC26.3■■□□□ 1.8
SCAF11Q99590 AC040169.1-201ENST00000565382 521 ntBASIC26.3■■□□□ 1.8
SCAF11Q99590 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC26.3■■□□□ 1.8
SCAF11Q99590 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
SCAF11Q99590 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SCAF11Q99590 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SCAF11Q99590 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC26.29■■□□□ 1.8
SCAF11Q99590 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCAF11Q99590 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC26.29■■□□□ 1.8
SCAF11Q99590 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC26.29■■□□□ 1.8
SCAF11Q99590 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SCAF11Q99590 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCAF11Q99590 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC26.29■■□□□ 1.8
SCAF11Q99590 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SCAF11Q99590 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC26.29■■□□□ 1.8
SCAF11Q99590 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCAF11Q99590 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC26.28■■□□□ 1.8
SCAF11Q99590 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF11Q99590 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF11Q99590 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF11Q99590 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC26.28■■□□□ 1.8
SCAF11Q99590 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC26.28■■□□□ 1.8
SCAF11Q99590 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF11Q99590 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
SCAF11Q99590 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF11Q99590 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF11Q99590 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF11Q99590 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF11Q99590 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
SCAF11Q99590 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF11Q99590 MEG3-211ENST00000452514 461 ntTSL 3 BASIC26.28■■□□□ 1.8
SCAF11Q99590 PNMT-203ENST00000581428 677 ntTSL 2 BASIC26.28■■□□□ 1.8
SCAF11Q99590 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
SCAF11Q99590 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SCAF11Q99590 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF11Q99590 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC26.28■■□□□ 1.8
SCAF11Q99590 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF11Q99590 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF11Q99590 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC26.27■■□□□ 1.8
SCAF11Q99590 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF11Q99590 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SCAF11Q99590 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF11Q99590 KRT18P3-201ENST00000451602 1288 ntBASIC26.27■■□□□ 1.8
SCAF11Q99590 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC26.27■■□□□ 1.8
SCAF11Q99590 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC26.27■■□□□ 1.8
SCAF11Q99590 AC134684.3-201ENST00000641758 218 ntBASIC26.27■■□□□ 1.8
SCAF11Q99590 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF11Q99590 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF11Q99590 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SCAF11Q99590 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC26.27■■□□□ 1.8
SCAF11Q99590 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF11Q99590 AL049812.1-201ENST00000432563 2267 ntBASIC26.27■■□□□ 1.8
SCAF11Q99590 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF11Q99590 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF11Q99590 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF11Q99590 KRT8P50-201ENST00000562022 1438 ntBASIC26.27■■□□□ 1.8
SCAF11Q99590 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF11Q99590 INTS4P1-201ENST00000438455 1935 ntBASIC26.26■■□□□ 1.79
SCAF11Q99590 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF11Q99590 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF11Q99590 HLA-J-201ENST00000462773 1622 ntBASIC26.26■■□□□ 1.79
SCAF11Q99590 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF11Q99590 RPS8P6-201ENST00000426177 609 ntBASIC26.26■■□□□ 1.79
SCAF11Q99590 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF11Q99590 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC26.26■■□□□ 1.79
SCAF11Q99590 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC26.26■■□□□ 1.79
SCAF11Q99590 AC092910.1-201ENST00000482027 1129 ntBASIC26.26■■□□□ 1.79
SCAF11Q99590 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF11Q99590 AC083906.6-201ENST00000641366 219 ntBASIC26.26■■□□□ 1.79
SCAF11Q99590 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF11Q99590 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF11Q99590 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC26.26■■□□□ 1.79
SCAF11Q99590 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF11Q99590 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF11Q99590 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC26.26■■□□□ 1.79
SCAF11Q99590 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF11Q99590 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF11Q99590 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms