Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 HLA-B-256ENST00000639848 1089 ntBASIC15.83■□□□□ 0.12
CMTM3Q96MX0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 KRT8P11-201ENST00000409686 1436 ntBASIC15.83■□□□□ 0.12
CMTM3Q96MX0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 AL118508.1-201ENST00000613502 2345 ntBASIC15.83■□□□□ 0.12
CMTM3Q96MX0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CMTM3Q96MX0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 AF201337.1-201ENST00000520239 748 ntBASIC15.82■□□□□ 0.12
CMTM3Q96MX0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 AC087623.3-201ENST00000607047 1098 ntBASIC15.82■□□□□ 0.12
CMTM3Q96MX0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 RCC2P3-201ENST00000418112 1537 ntBASIC15.82■□□□□ 0.12
CMTM3Q96MX0 AC092368.3-202ENST00000574180 1591 ntBASIC15.82■□□□□ 0.12
CMTM3Q96MX0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CMTM3Q96MX0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 DUSP5P2-201ENST00000426873 1033 ntBASIC15.81■□□□□ 0.12
CMTM3Q96MX0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.81■□□□□ 0.12
CMTM3Q96MX0 AC022211.2-201ENST00000585075 2527 ntBASIC15.81■□□□□ 0.12
CMTM3Q96MX0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 AL109659.2-201ENST00000606809 1674 ntBASIC15.8■□□□□ 0.12
CMTM3Q96MX0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 AC011676.5-201ENST00000624864 2660 ntBASIC15.8■□□□□ 0.12
CMTM3Q96MX0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 Z85996.1-201ENST00000494644 937 ntBASIC15.8■□□□□ 0.12
CMTM3Q96MX0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.8■□□□□ 0.12
CMTM3Q96MX0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms