Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC47A1Q96FL8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC47A1Q96FL8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 NIFKP9-201ENST00000419265 221 ntBASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 AP002982.1-201ENST00000492365 877 ntBASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 KRT8P3-201ENST00000519669 1449 ntBASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 C1QBPP2-201ENST00000528754 825 ntBASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
SLC47A1Q96FL8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC47A1Q96FL8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC47A1Q96FL8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC47A1Q96FL8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC47A1Q96FL8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC47A1Q96FL8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
SLC47A1Q96FL8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC47A1Q96FL8 SIRPAP1-201ENST00000448467 1770 ntBASIC17.33■□□□□ 0.37
SLC47A1Q96FL8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC47A1Q96FL8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC47A1Q96FL8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC47A1Q96FL8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 KRT8P11-201ENST00000409686 1436 ntBASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 Z85996.1-201ENST00000494644 937 ntBASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 AL353708.3-201ENST00000610272 989 ntBASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC47A1Q96FL8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC47A1Q96FL8 FLJ13224-201ENST00000313737 1514 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms