Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHCHD1Q96BP2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CHCHD1Q96BP2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHCHD1Q96BP2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHCHD1Q96BP2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHCHD1Q96BP2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
CHCHD1Q96BP2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 KRT8P45-201ENST00000414328 1447 ntBASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 AC027682.1-201ENST00000562846 899 ntBASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 AL138688.1-201ENST00000624851 1594 ntBASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.39□□□□□ -0.27
CHCHD1Q96BP2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 AL162412.1-201ENST00000567129 965 ntBASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 AL096828.2-201ENST00000567259 1965 ntBASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.38□□□□□ -0.27
CHCHD1Q96BP2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.37□□□□□ -0.27
CHCHD1Q96BP2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CHCHD1Q96BP2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHCHD1Q96BP2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHCHD1Q96BP2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHCHD1Q96BP2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHCHD1Q96BP2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CHCHD1Q96BP2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHCHD1Q96BP2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHCHD1Q96BP2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms