Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH3KBP1Q96B97 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SH3KBP1Q96B97 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SH3KBP1Q96B97 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.22■□□□□ 0.51
SH3KBP1Q96B97 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH3KBP1Q96B97 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH3KBP1Q96B97 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.22■□□□□ 0.51
SH3KBP1Q96B97 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SH3KBP1Q96B97 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
SH3KBP1Q96B97 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 AC036111.1-201ENST00000533973 1582 ntBASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 AL358472.4-201ENST00000633140 710 ntBASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 AP000550.4-202ENST00000639755 178 ntBASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 RCC2P3-201ENST00000418112 1537 ntBASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SH3KBP1Q96B97 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
SH3KBP1Q96B97 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 AC112907.2-201ENST00000448639 330 ntBASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 AL138781.2-201ENST00000617896 1843 ntBASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 KRT8P7-201ENST00000533003 1432 ntBASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH3KBP1Q96B97 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 LETM1P2-201ENST00000597330 2178 ntBASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 AC112497.1-201ENST00000624824 639 ntBASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH3KBP1Q96B97 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms