Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCG3Q8WXD2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCG3Q8WXD2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCG3Q8WXD2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCG3Q8WXD2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.83■□□□□ 0.61
SCG3Q8WXD2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCG3Q8WXD2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.83■□□□□ 0.61
SCG3Q8WXD2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCG3Q8WXD2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCG3Q8WXD2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 AC090164.3-201ENST00000610780 2143 ntBASIC18.83■□□□□ 0.6
SCG3Q8WXD2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.83■□□□□ 0.6
SCG3Q8WXD2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCG3Q8WXD2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 AC012313.1-201ENST00000593393 3059 ntBASIC18.82■□□□□ 0.6
SCG3Q8WXD2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 AK4P3-201ENST00000418260 669 ntBASIC18.82■□□□□ 0.6
SCG3Q8WXD2 AC007663.1-201ENST00000438948 1240 ntBASIC18.82■□□□□ 0.6
SCG3Q8WXD2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 CKBP1-201ENST00000565489 1086 ntBASIC18.82■□□□□ 0.6
SCG3Q8WXD2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 WIZP1-201ENST00000531444 2299 ntBASIC18.82■□□□□ 0.6
SCG3Q8WXD2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.82■□□□□ 0.6
SCG3Q8WXD2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 INGX-201ENST00000359239 846 ntBASIC18.81■□□□□ 0.6
SCG3Q8WXD2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.81■□□□□ 0.6
SCG3Q8WXD2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 AC087388.1-201ENST00000571370 1112 ntBASIC18.81■□□□□ 0.6
SCG3Q8WXD2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 HEIH-201ENST00000623091 1652 ntBASIC18.81■□□□□ 0.6
SCG3Q8WXD2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCG3Q8WXD2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms