Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 AC016734.2-201ENST00000624325 1377 ntBASIC16.57■□□□□ 0.24
RNF138Q8WVD3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 TSPY22P-201ENST00000427496 604 ntBASIC16.57■□□□□ 0.24
RNF138Q8WVD3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 RN7SL606P-201ENST00000472779 293 ntBASIC16.57■□□□□ 0.24
RNF138Q8WVD3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 AL353801.3-201ENST00000609898 542 ntBASIC16.57■□□□□ 0.24
RNF138Q8WVD3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.57■□□□□ 0.24
RNF138Q8WVD3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 AL096828.2-201ENST00000567259 1965 ntBASIC16.57■□□□□ 0.24
RNF138Q8WVD3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF138Q8WVD3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 KRT18P65-201ENST00000439811 1286 ntBASIC16.56■□□□□ 0.24
RNF138Q8WVD3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.56■□□□□ 0.24
RNF138Q8WVD3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF138Q8WVD3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 AL121672.3-201ENST00000608644 468 ntBASIC16.55■□□□□ 0.24
RNF138Q8WVD3 AC009154.2-201ENST00000621177 724 ntBASIC16.55■□□□□ 0.24
RNF138Q8WVD3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF138Q8WVD3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF138Q8WVD3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms