Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.1■□□□□ 0.33
CT55Q8WUE5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CT55Q8WUE5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.1■□□□□ 0.33
CT55Q8WUE5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.1■□□□□ 0.33
CT55Q8WUE5 AL024508.2-201ENST00000607749 1894 ntBASIC17.1■□□□□ 0.33
CT55Q8WUE5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 SDHAP2-201ENST00000455183 2001 ntBASIC17.09■□□□□ 0.33
CT55Q8WUE5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.09■□□□□ 0.33
CT55Q8WUE5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.09■□□□□ 0.33
CT55Q8WUE5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.09■□□□□ 0.33
CT55Q8WUE5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.09■□□□□ 0.33
CT55Q8WUE5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CT55Q8WUE5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 MIR5100-201ENST00000579544 119 ntBASIC17.09■□□□□ 0.33
CT55Q8WUE5 TP73-AS1-207ENST00000624167 988 ntBASIC17.09■□□□□ 0.33
CT55Q8WUE5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.09■□□□□ 0.33
CT55Q8WUE5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.09■□□□□ 0.33
CT55Q8WUE5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CT55Q8WUE5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.09■□□□□ 0.33
CT55Q8WUE5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.09■□□□□ 0.33
CT55Q8WUE5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CT55Q8WUE5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CT55Q8WUE5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CT55Q8WUE5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CT55Q8WUE5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CT55Q8WUE5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.08■□□□□ 0.33
CT55Q8WUE5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CT55Q8WUE5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CT55Q8WUE5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CT55Q8WUE5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CT55Q8WUE5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CT55Q8WUE5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.08■□□□□ 0.32
CT55Q8WUE5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.08■□□□□ 0.32
CT55Q8WUE5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CT55Q8WUE5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CT55Q8WUE5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.08■□□□□ 0.32
CT55Q8WUE5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CT55Q8WUE5 HLA-A-201ENST00000376802 1334 ntBASIC17.08■□□□□ 0.32
CT55Q8WUE5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.08■□□□□ 0.32
CT55Q8WUE5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CT55Q8WUE5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CT55Q8WUE5 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.08■□□□□ 0.32
CT55Q8WUE5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CT55Q8WUE5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.08■□□□□ 0.32
CT55Q8WUE5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.08■□□□□ 0.32
CT55Q8WUE5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CT55Q8WUE5 AC114341.1-201ENST00000618070 349 ntBASIC17.08■□□□□ 0.32
CT55Q8WUE5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CT55Q8WUE5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.08■□□□□ 0.32
CT55Q8WUE5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.08■□□□□ 0.32
CT55Q8WUE5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.08■□□□□ 0.32
CT55Q8WUE5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CT55Q8WUE5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CT55Q8WUE5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CT55Q8WUE5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CT55Q8WUE5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CT55Q8WUE5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CT55Q8WUE5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CT55Q8WUE5 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CT55Q8WUE5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.07■□□□□ 0.32
CT55Q8WUE5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CT55Q8WUE5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.06■□□□□ 0.32
CT55Q8WUE5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CT55Q8WUE5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CT55Q8WUE5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CT55Q8WUE5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.06■□□□□ 0.32
CT55Q8WUE5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CT55Q8WUE5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CT55Q8WUE5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CT55Q8WUE5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CT55Q8WUE5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms