Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RPS4Y2Q8TD47 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 KRT18P55-202ENST00000578578 1546 ntBASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 SDHAP2-201ENST00000455183 2001 ntBASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 FAM207BP-201ENST00000447172 505 ntBASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 AL031985.4-201ENST00000642138 673 ntBASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPS4Y2Q8TD47 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
RPS4Y2Q8TD47 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RPS4Y2Q8TD47 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RPS4Y2Q8TD47 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RPS4Y2Q8TD47 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.08■□□□□ 0.17
RPS4Y2Q8TD47 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 AC011506.1-201ENST00000474329 610 ntBASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 AC108860.2-201ENST00000562760 2183 ntBASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 GPAT2P1-201ENST00000444924 1672 ntBASIC16.08■□□□□ 0.16
RPS4Y2Q8TD47 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms