Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 RPSAP43-201ENST00000402237 625 ntBASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 GPX1P2-201ENST00000429271 606 ntBASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 IGHV3-22-201ENST00000520721 359 ntBASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 AC104109.2-201ENST00000602919 1418 ntBASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SNIP1Q8TAD8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 AC010327.4-202ENST00000591484 748 ntBASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 AL356488.2-201ENST00000602755 427 ntBASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNIP1Q8TAD8 AC006333.2-201ENST00000607957 2099 ntBASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 TREX1-205ENST00000625293 1783 ntBASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 DNAJB3-201ENST00000446806 729 ntBASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 MTDHP3-201ENST00000594186 672 ntBASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 AL162377.1-201ENST00000618844 1793 ntBASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.28■□□□□ 0.36
SNIP1Q8TAD8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms