Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 AD000864.1-201ENST00000624076 2295 ntBASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD2Q8NHY2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD2Q8NHY2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 AL096828.2-201ENST00000567259 1965 ntBASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 MYLKP1-201ENST00000509077 1580 ntBASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFWD2Q8NHY2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD2Q8NHY2 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.15■□□□□ 0.5
RFWD2Q8NHY2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.15■□□□□ 0.5
RFWD2Q8NHY2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RFWD2Q8NHY2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RFWD2Q8NHY2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms