Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC005336.2-201ENST00000593183 939 ntBASIC22.59■■□□□ 1.21
RTL9Q8NET4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 REXO1L6P-202ENST00000619970 1078 ntBASIC22.59■■□□□ 1.21
RTL9Q8NET4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTL9Q8NET4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.58■■□□□ 1.21
RTL9Q8NET4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTL9Q8NET4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
RTL9Q8NET4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTL9Q8NET4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTL9Q8NET4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTL9Q8NET4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.58■■□□□ 1.21
RTL9Q8NET4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RTL9Q8NET4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTL9Q8NET4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTL9Q8NET4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTL9Q8NET4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC22.58■■□□□ 1.21
RTL9Q8NET4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC22.58■■□□□ 1.21
RTL9Q8NET4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC22.58■■□□□ 1.21
RTL9Q8NET4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC22.58■■□□□ 1.21
RTL9Q8NET4 GPALPP1-207ENST00000611650 899 ntBASIC22.58■■□□□ 1.21
RTL9Q8NET4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC22.58■■□□□ 1.21
RTL9Q8NET4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC22.58■■□□□ 1.21
RTL9Q8NET4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RTL9Q8NET4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RTL9Q8NET4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RTL9Q8NET4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC22.57■■□□□ 1.2
RTL9Q8NET4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTL9Q8NET4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.57■■□□□ 1.2
RTL9Q8NET4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.57■■□□□ 1.2
RTL9Q8NET4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTL9Q8NET4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTL9Q8NET4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTL9Q8NET4 POM121L3P-201ENST00000419331 1163 ntBASIC22.57■■□□□ 1.2
RTL9Q8NET4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC22.57■■□□□ 1.2
RTL9Q8NET4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
RTL9Q8NET4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC22.57■■□□□ 1.2
RTL9Q8NET4 LINC01711-201ENST00000598340 967 ntBASIC22.57■■□□□ 1.2
RTL9Q8NET4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTL9Q8NET4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RTL9Q8NET4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RTL9Q8NET4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RTL9Q8NET4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RTL9Q8NET4 HLA-A-201ENST00000376802 1334 ntBASIC22.57■■□□□ 1.2
RTL9Q8NET4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTL9Q8NET4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTL9Q8NET4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTL9Q8NET4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RTL9Q8NET4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTL9Q8NET4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTL9Q8NET4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.56■■□□□ 1.2
RTL9Q8NET4 EMD-201ENST00000369835 966 ntTSL 3 BASIC22.56■■□□□ 1.2
RTL9Q8NET4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTL9Q8NET4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC22.56■■□□□ 1.2
RTL9Q8NET4 SAPCD2P3-201ENST00000455031 850 ntBASIC22.56■■□□□ 1.2
RTL9Q8NET4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC22.56■■□□□ 1.2
RTL9Q8NET4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC22.56■■□□□ 1.2
RTL9Q8NET4 AC009154.2-201ENST00000621177 724 ntBASIC22.56■■□□□ 1.2
RTL9Q8NET4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RTL9Q8NET4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTL9Q8NET4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RTL9Q8NET4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
RTL9Q8NET4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTL9Q8NET4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTL9Q8NET4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RTL9Q8NET4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RTL9Q8NET4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.55■■□□□ 1.2
RTL9Q8NET4 NUS1P2-201ENST00000417358 873 ntBASIC22.55■■□□□ 1.2
RTL9Q8NET4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC22.55■■□□□ 1.2
RTL9Q8NET4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC22.55■■□□□ 1.2
RTL9Q8NET4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC22.55■■□□□ 1.2
RTL9Q8NET4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC22.55■■□□□ 1.2
RTL9Q8NET4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.55■■□□□ 1.2
RTL9Q8NET4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC22.55■■□□□ 1.2
RTL9Q8NET4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.55■■□□□ 1.2
RTL9Q8NET4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 AC114341.1-201ENST00000618070 349 ntBASIC22.55■■□□□ 1.2
RTL9Q8NET4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.55■■□□□ 1.2
RTL9Q8NET4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 LINC01126-201ENST00000623515 1646 ntBASIC22.55■■□□□ 1.2
RTL9Q8NET4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTL9Q8NET4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.54■■□□□ 1.2
RTL9Q8NET4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTL9Q8NET4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTL9Q8NET4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTL9Q8NET4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTL9Q8NET4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTL9Q8NET4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTL9Q8NET4 AC068472.1-201ENST00000474589 881 ntBASIC22.54■■□□□ 1.2
RTL9Q8NET4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC22.54■■□□□ 1.2
RTL9Q8NET4 AC079776.4-201ENST00000511039 504 ntBASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms