Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNEP1R1Q8N9A8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.32■□□□□ 0.2
CNEP1R1Q8N9A8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CNEP1R1Q8N9A8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNEP1R1Q8N9A8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNEP1R1Q8N9A8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNEP1R1Q8N9A8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CNEP1R1Q8N9A8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.32■□□□□ 0.2
CNEP1R1Q8N9A8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNEP1R1Q8N9A8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 Z83836.1-201ENST00000624605 1642 ntBASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 AL163051.1-201ENST00000569214 1512 ntBASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 RNF126P1-202ENST00000569893 925 ntBASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 AC092329.2-201ENST00000598402 547 ntBASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CNEP1R1Q8N9A8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 AC016734.2-201ENST00000624325 1377 ntBASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 AC024563.2-201ENST00000603282 481 ntBASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNEP1R1Q8N9A8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CNEP1R1Q8N9A8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNEP1R1Q8N9A8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNEP1R1Q8N9A8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNEP1R1Q8N9A8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNEP1R1Q8N9A8 KRT18P1-202ENST00000452408 1331 ntBASIC16.29■□□□□ 0.2
CNEP1R1Q8N9A8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CNEP1R1Q8N9A8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.29■□□□□ 0.2
CNEP1R1Q8N9A8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNEP1R1Q8N9A8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNEP1R1Q8N9A8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CNEP1R1Q8N9A8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms