Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC89Q8N998 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC89Q8N998 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC89Q8N998 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC89Q8N998 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC89Q8N998 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC89Q8N998 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC89Q8N998 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC89Q8N998 GNAS-203ENST00000306120 1878 ntBASIC19.09■□□□□ 0.65
CCDC89Q8N998 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC89Q8N998 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC89Q8N998 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC89Q8N998 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC89Q8N998 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC89Q8N998 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC89Q8N998 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC89Q8N998 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC89Q8N998 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC89Q8N998 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC89Q8N998 LTB4R2-202ENST00000528054 3092 ntBASIC19.09■□□□□ 0.65
CCDC89Q8N998 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC89Q8N998 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC89Q8N998 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC89Q8N998 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC89Q8N998 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC89Q8N998 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC89Q8N998 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC89Q8N998 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC89Q8N998 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC89Q8N998 AC020916.1-201ENST00000587762 1774 ntBASIC19.09■□□□□ 0.65
CCDC89Q8N998 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC89Q8N998 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC89Q8N998 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC89Q8N998 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC89Q8N998 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC89Q8N998 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC89Q8N998 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC89Q8N998 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC89Q8N998 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CCDC89Q8N998 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC89Q8N998 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC89Q8N998 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC89Q8N998 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CCDC89Q8N998 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC89Q8N998 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CCDC89Q8N998 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC89Q8N998 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CCDC89Q8N998 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC89Q8N998 MESTP1-201ENST00000404287 994 ntBASIC19.08■□□□□ 0.64
CCDC89Q8N998 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC89Q8N998 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC89Q8N998 ITM2C-210ENST00000620962 501 ntBASIC19.08■□□□□ 0.64
CCDC89Q8N998 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC89Q8N998 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC89Q8N998 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC89Q8N998 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CCDC89Q8N998 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC89Q8N998 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC89Q8N998 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC89Q8N998 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC89Q8N998 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC89Q8N998 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC89Q8N998 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC89Q8N998 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC89Q8N998 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC89Q8N998 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 MCCD1P1-208ENST00000445732 328 ntBASIC19.07■□□□□ 0.64
CCDC89Q8N998 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 AC008622.2-201ENST00000617006 1229 ntBASIC19.07■□□□□ 0.64
CCDC89Q8N998 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC89Q8N998 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC89Q8N998 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC89Q8N998 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC89Q8N998 AC134043.2-201ENST00000624206 2238 ntBASIC19.06■□□□□ 0.64
CCDC89Q8N998 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC89Q8N998 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC89Q8N998 AC096733.2-201ENST00000609937 1394 ntBASIC19.06■□□□□ 0.64
CCDC89Q8N998 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC89Q8N998 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC89Q8N998 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC89Q8N998 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC89Q8N998 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC89Q8N998 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CCDC89Q8N998 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC89Q8N998 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC89Q8N998 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC89Q8N998 REXO1L9P-201ENST00000604264 2108 ntBASIC19.06■□□□□ 0.64
CCDC89Q8N998 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms