Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 KRT18P57-201ENST00000443599 1254 ntBASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 NAPSB-206ENST00000562112 1266 ntBASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
EFCAB3Q8N7B9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 KRT18P22-201ENST00000402024 1347 ntBASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 MIR1238-201ENST00000408483 83 ntBASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 RBM17P1-201ENST00000453646 1190 ntBASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EFCAB3Q8N7B9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.27■□□□□ 0.51
EFCAB3Q8N7B9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.27■□□□□ 0.51
EFCAB3Q8N7B9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.27■□□□□ 0.51
EFCAB3Q8N7B9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
EFCAB3Q8N7B9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.27■□□□□ 0.51
EFCAB3Q8N7B9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
EFCAB3Q8N7B9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 AL160286.2-201ENST00000567150 934 ntBASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EFCAB3Q8N7B9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EFCAB3Q8N7B9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms