Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF7Q8N684 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.99■□□□□ 0.47
CPSF7Q8N684 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF7Q8N684 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CPSF7Q8N684 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF7Q8N684 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF7Q8N684 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF7Q8N684 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF7Q8N684 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF7Q8N684 AC087499.1-201ENST00000418141 1075 ntBASIC17.99■□□□□ 0.47
CPSF7Q8N684 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.99■□□□□ 0.47
CPSF7Q8N684 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF7Q8N684 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.99■□□□□ 0.47
CPSF7Q8N684 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CPSF7Q8N684 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.99■□□□□ 0.47
CPSF7Q8N684 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.99■□□□□ 0.47
CPSF7Q8N684 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.99■□□□□ 0.47
CPSF7Q8N684 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF7Q8N684 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.99■□□□□ 0.47
CPSF7Q8N684 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPSF7Q8N684 FZD10-202ENST00000539839 3282 ntBASIC17.99■□□□□ 0.47
CPSF7Q8N684 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CPSF7Q8N684 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 KRT8P3-201ENST00000519669 1449 ntBASIC17.98■□□□□ 0.47
CPSF7Q8N684 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 AC133561.5-201ENST00000635547 218 ntBASIC17.98■□□□□ 0.47
CPSF7Q8N684 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPSF7Q8N684 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CPSF7Q8N684 FLJ13224-201ENST00000313737 1514 ntBASIC17.98■□□□□ 0.47
CPSF7Q8N684 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.97■□□□□ 0.47
CPSF7Q8N684 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CPSF7Q8N684 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.97■□□□□ 0.47
CPSF7Q8N684 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.97■□□□□ 0.47
CPSF7Q8N684 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.97■□□□□ 0.47
CPSF7Q8N684 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.97■□□□□ 0.47
CPSF7Q8N684 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.97■□□□□ 0.47
CPSF7Q8N684 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.97■□□□□ 0.47
CPSF7Q8N684 AL353708.3-201ENST00000610272 989 ntBASIC17.97■□□□□ 0.47
CPSF7Q8N684 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CPSF7Q8N684 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPSF7Q8N684 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPSF7Q8N684 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPSF7Q8N684 REXO1L9P-201ENST00000604264 2108 ntBASIC17.96■□□□□ 0.47
CPSF7Q8N684 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPSF7Q8N684 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPSF7Q8N684 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.96■□□□□ 0.47
CPSF7Q8N684 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPSF7Q8N684 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPSF7Q8N684 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPSF7Q8N684 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms